Modern Research Techniques of Apoptotic Cell Death (Review)
The review concerns modern research techniques of apoptotic cell death in vitro and in vivo. Apoptosis monitoring has been shown to be based on recording characteristic cell changes: integrity loss and depolarization of plasma membrane, phosphatidylserine and phosphatidylethanolamine exposure on cell membrane surface, activation of caspases, mitochondrial membrane depolarization, DNA fragmentation, the changed level of biochemical markers. The major techniques for in vitro apoptosis studies are light and electron microscopy, flow cytometry, fluorescent microscopy, immunohistochemistry, enzyme immunoassay, Western blot, electrophoresis and TUNEL technique. Currently, noninvasive techniques used to study apoptosis in vivo are of great importance since they are capable of recording the process in tissues, organs and the whole body: positron emission tomography (PET), single-photon emission computed tomography (SPECT), magnetic resonance tomography (MRT), fluorescent spectroscopy, FLIM/FRET-imaging. Great attention is paid to the search for contrast agents specific to various molecules of an apoptotic cascade. The nature of apoptotic reactions has been demonstrated to serve as a marker of chemotherapeutic efficiency and help choosing chemotherapy. A combination of several techniques to study apoptotic cell death has been found to gain its popularity, e.g. SPECT and optical imaging, PET and optical imaging, PET and MRT. In the long term, by means of these techniques it will be possible both to determine the disease severity and also assess the treatment efficiency.
- Goldar S., Khaniani M.S., Derakhshan S.M., Baradaran B. Molecular mechanisms of apoptosis and roles in cancer development and treatment. Asian Pac J Cancer Prev 2015; 16(6): 2129–2144.
- Labi V., Erlacher M. How cell death shapes cancer. Cell Death Dis 2015; 6: e1675, http://dx.doi.org/10.1038/cddis.2015.20.
- Wong R.S. Apoptosis in cancer: from pathogenesis to treatment. J Exp Clin Cancer Res 2011; 30: 87, http://dx.doi.org/10.1186/1756-9966-30-87.
- Su Z., Yang Z., Xu Y., Chen Y., Yu Q. Apoptosis, autophagy, necroptosis, and cancer metastasis. Mol Cancer 2015; 14(1): 48, http://dx.doi.org/10.1186/s12943-015-0321-5.
- Lopez J., Tait S.W. Mitochondrial apoptosis: killing cancer using the enemy within. Br J Cancer 2015; 112(6): 957–962, http://dx.doi.org/10.1038/bjc.2015.85.
- Huang Q., Li F., Liu X., Li W., Shi W., Liu F.F., O’Sullivan B., He Z., Peng Y., Tan A.C., Zhou L., Shen J., Han G., Wang X.J., Thorburn J., Thorburn A., Jimeno A., Raben D., Bedford J.S., Li C.Y. Caspase 3-mediated stimulation of tumor cell repopulation during cancer radiotherapy. Nat Med 2011 Jul; 17(7): 860–866, http://dx.doi.org/10.1038/nm.2385.
- Smith B.A., Smith B.D. Biomarkers and molecular probes for cell death imaging and targeted therapeutics. Bioconjug Chem 2012; 23(10): 1989–2006, http://dx.doi.org/10.1021/bc3003309.
- Neves A.A., Brindle K.M. Imaging cell death. J Nucl Med 2014; 55(1): 1–4, http://dx.doi.org/10.2967/jnumed.112.114264.
- Bernsen M.R., Kooiman K., Segbers M., van Leeuwen F.W., de Jong M. Biomarkers in preclinical cancer imaging. Eur J Nucl Med Mol Imaging 2015; 42(4): 579–596, http://dx.doi.org/10.1007/s00259-014-2980-7.
- Zeng W., Wang X., Xu P., Liu G., Eden H.S., Chen X. Molecular imaging of apoptosis: from micro to macro. Theranostics 2015; 5(6): 559–582, http://dx.doi.org/10.7150/thno.11548.
- Kasagi N., Gomyo Y., Shirai H., Tsujitani S., Ito H. Apoptotic cell death in human gastric carcinoma: analysis by terminal deoxynucleotidyl transferase-mediated dUTP-biotin nick end labeling. Jpn J Cancer Res 1994; 85(9): 939–945, http://dx.doi.org/10.1111/j.1349-7006.1994.tb02972.x.
- Jolly P.D., Smith P.R., Heath D.A., Hudson N.L., Lun S., Still L.A., Watts C.H., McNatty K.P. Morphological evidence of apoptosis and the prevalence of apoptotic versus mitotic cells in the membrana granulosa of ovarian follicles during spontaneous and induced atresia in ewes. Biol Reprod 1997; 56(4): 837–846, http://dx.doi.org/10.1095/biolreprod56.4.837.
- Drachenberg C.B., Ioffe O.B., Papadimitriou J.C. Progressive increase of apoptosis in prostatic intraepithelial neoplasia and carcinoma: comparison between in situ end-labeling of fragmented DNA and detection by routine hematoxylin-eosin staining. Arch Pathol Lab Med 1997; 121(1): 54–58.
- Chyle V., Pollack A., Czerniak B., Stephens L.C., Zagars G.K., Terry N.H., Meyn R.E. Apoptosis and downstaging after preoperative radiotherapy for muscle-invasive bladder cancer. Int J Radiat Oncol Biol Phys 1996; 35(2): 281–287, http://dx.doi.org/10.1016/0360-3016(96)00089-2.
- Huang R.F., Wei Y.J., Inbaraj B.S., Chen B.H. Inhibition of colon cancer cell growth by nanoemulsion carrying gold nanoparticles and lycopene. Int J Nanomedicine 2015; 10: 2823–2846, http://dx.doi.org/10.2147/IJN.S79107.
- Li Q., Ren F.Q., Yang C.L., Zhou L.M., Liu Y.Y., Xiao J., Zhu L., Wang Z.G. Anti-proliferation effects of isorhamnetin on lung cancer cells in vitro and in vivo. Asian Pac J Cancer Prev 2015; 16(7): 3035–3042.
- Voitkova V.V. Study of apoptosis with use of flow cytometry. Bulletin of the East Siberian Scientific Center SB RAMS 2010; 76(6 Part 1): 220–225.
- Ogawa K., Aoki M. Radiolabeled apoptosis imaging agents for early detection of response to therapy. Scientific World Journal 2014; 2014: 732603, http://dx.doi.org/10.1155/2014/732603.
- Damianovich M., Ziv I., Heyman S.N., Rosen S., Shina A., Kidron D., Aloya T., Grimberg H., Levin G., Reshef A., Bentolila A., Cohen A., Shirvan A. ApoSense: a novel technology for functional molecular imaging of cell death in models of acute renal tubular necrosis. Eur J Nucl Med Mol Imaging 2006; 33(3): 281–291, http://dx.doi.org/10.1007/s00259-005-1905-x.
- Reshef A., Shirvan A., Akselrod-Ballin A., Wall A., Ziv I. Small-molecule biomarkers for clinical PET imaging of apoptosis. J Nucl Med 2010; 51(6): 837–840, http://dx.doi.org/10.2967/jnumed.109.063917.
- Reshef A., Shirvan A., Waterhouse R. N., Grimberg H., Levin G., Cohen A., Ulysse L.G., Friedman G., Antoni G., Ziv I. Molecular imaging of neurovascular cell death in experimental cerebral stroke by PET. J Nucl Med 2008; 49(9): 1520–1528, http://dx.doi.org/10.2967/jnumed.107.043919.
- Höglund J., Shirvan A., Antoni G., Gustavsson S.A., Langström B., Ringheim A., Sörensen J., Ben-Ami M., Ziv I. 18F-ML-10, a PET tracer for apoptosis: first human study. J Nucl Med 2011; 52(5): 720–725, http://dx.doi.org/10.2967/jnumed.110.081786.
- Shirvan A., Reshef A., Allen A., Fenig E., Stenmetz A., Groshar D., et al. Apoptosis imaging with PET-18F-ML-10 for early assessment of response of brain metastases to radiotherapy. J Nucl Med 2009; 50(Suppl 2): S453.
- Allen A.M., Ben-Ami M., Reshef A., Steinmetz A., Kundel Y., Inbar E., Djaldetti R., Davidson T., Fenig E., Ziv I. Assessment of response of brain metastases to radiotherapy by PET imaging of apoptosis with 18F-ML-10. Eur J Nucl Med Mol Imaging 2012; 39(9): 1400–1408, http://dx.doi.org/10.1007/s00259-012-2150-8.
- Bauwens M., de Saint-Hubert M., Cleynhens J., Vandeputte C., Li J., Devos E., Hendrickx S., Ni Y., Reutelingsperger C., Mortelmans L., Mottaghy F.M., Verbruggen A. In vitro and in vivo comparison of 18F and 123I-labeled ML10 with 68Ga-Cys2-AnxA5 for molecular imaging of apoptosis. Q J Nucl Med Mol Imaging 2013; 57(2): 187–200.
- Alam I.S., Neves A.A., Witney T.H., Boren J., Brindle K.M. Comparison of the C2A domain of synaptotagmin-I and annexin-V as probes for detecting cell death. Bioconjug Chem 2010; 21: 884–891, http://dx.doi.org/10.1021/bc9004415.
- Gerke V., Moss S.E. Annexins: from structure to function. Physiol Rev 2002; 82(2): 331–371.
- Lu Y.Y., Chen T.S., Qu J.L., Pan W.L., Sun L., Wei X.B. Dihydroartemisinin (DHA) induces caspase-3-dependent apoptosis in human lung adenocarcinoma ASTC-a-1 cells. J Biomed Sci 2009; 16: 16, http://dx.doi.org/10.1186/1423-0127-16-16.
- Fomin A.S., Koval O.A., Semenov D.V., Potapenko M.O., Kuligina E.V., Kit Yu.Ya. Richter V.A. The analysis of biomedical markers of MCF-7 cells apoptosis induced by recombinant analog of lactaptin. Russian Journal of Bioorganic Chemistry 2012; 38(1): 77–82, http://dx.doi.org/10.1134/s1068162012010086.
- Blankenberg F.G., Katsikis P.D., Tait J.F., Davis R.E., Naumovski L., Ohtsuki K., Kopiwoda S., Abrams M.J., Darkes M., Robbins R.C., Maecker H.T., Strauss H.W. In vivo detection and imaging of phosphatidylserine expression during programmed cell death. Proc Natl Acad Sci USA 1998; 95(11): 6349–6354, http://dx.doi.org/10.1073/pnas.95.11.6349.
- Kartachova M., van Zandwijk N., Burgers S., van Tinteren H., Verheij M., Valdés Olmos R.A. Prognostic significance of 99mTc Hynic-rh-annexin V scintigraphy during platinum-based chemotherapy in advanced lung cancer. J Clin Oncol 2007; 25(18): 2534–2539, http://dx.doi.org/10.1200/jco.2006.10.1337.
- Kartachova M.S., Valdés Olmos R.A., Haas R.L., Hoebers F.J., Herk M., Verheij M. 99mTc-HYNIC-rh-annexin-V scintigraphy: visual and quantitative evaluation of early treatment-induced apoptosis to predict treatment outcome. Nucl Med Commun 2008; 29(1): 39–44, http://dx.doi.org/10.1097/MNM.0b013e3282f1bc22.
- Hu S., Kiesewetter D.O., Zhu L., Guo N., Gao H., Liu G., Hida N., Lang L., Niu G., Chen X. Longitudinal PET imaging of doxorubicin-induced cell death with 18F-annexin V. Mol Imaging Biol 2012; 14(6): 762–770, http://dx.doi.org/10.1007/s11307-012-0551-5.
- Niu G., Chen X. Apoptosis imaging: beyond annexin V. J Nucl Med 2010; 51(11): 1659–1662, http://dx.doi.org/10.2967/jnumed.110.078584.
- Igarashi K., Kaneda M., Yamaji A., Saido T.C., Kikkawa U., Ono Y., Inoue K., Umeda M. A novel phosphatidylserine-binding peptide motif defined by an anti-idiotypic monoclonal antibody. Localization of phosphatidylserine-specific binding sites on protein kinase C and phosphatidylserine decarboxylase. J Biol Chem 1995; 270(49): 29075–29078, http://dx.doi.org/10.1074/jbc.270.49.29075.
- Xiong C., Brewer K., Song S., Zhang R., Lu W., Wen X., Li C. Peptide-based imaging agents targeting phosphatidylserine for the detection of apoptosis. J Med Chem 2011; 54(6): 1825–1835, http://dx.doi.org/10.1021/jm101477d.
- Song S., Xiong C., Lu W., Ku G., Huang G., Li C. Apoptosis imaging probe predicts early chemotherapy response in preclinical models: a comparative study with 8F-FDG PET. J Nucl Med 2013; 54(1): 104–110, http://dx.doi.org/10.2967/jnumed.112.109397.
- Marconescu A., Thorpe P.E. Coincident exposure of phosphatidylethanolamine and anionic phospholipids on the surface of irradiated cells. Biochim Biophys Acta 2008; 1778(10): 2217–2224, http://dx.doi.org/10.1016/j.bbamem.2008.05.006.
- Zhao M., Li Z., Bugenhagen S. 99mTc-labeled duramycin as a novel phosphatidylethanolamine-binding molecular probe. J Nucl Med 2008; 49(8): 1345–1352, http://dx.doi.org/10.2967/jnumed.107.048603.
- Johnson S.E., Li Z., Liu Y., Moulder J.E., Zhao M. Whole-body imaging of high-dose ionizing irradiation-induced tissue injuries using 99mTc-duramycin. J Nucl Med 2013; 54(8): 1397–1403, http://dx.doi.org/10.2967/jnumed.112.112490.
- Yao S., Hu K., Tang G., Liang X., Du K., Nie D., Jiang S., Zang L. Positron emission tomography imaging of cell death with [18F]FPDuramycin. Apoptosis 2014; 19(5): 841–850, http://dx.doi.org/10.1007/s10495-013-0964-x.
- Luker G.D., Luker K.E. Optical imaging: current applications and future directions. J Nucl Med 2008; 49(1): 1–4, http://dx.doi.org/10.2967/jnumed.107.045799.
- Kumar S., Richards-Kortum R. Optical molecular imaging agents for cancer diagnostics and therapeutics. Nanomedicine 2006; 1: 23–30, http://dx.doi.org/10.2217/17435889.1.1.23.
- Achilefu S. The insatiable quest for near-infrared fluorescent probes for molecular imaging. Angew Chem Int Ed 2010; 49(51): 9816–9818, http://dx.doi.org/10.1002/anie.201005684.
- Petrovsky A., Schellenberger E., Josephson L., Weissleder R., Bogdanov A. Jr. Near-infrared fluorescent imaging of tumor apoptosis. Cancer Res 2003; 63(8): 1936–1942.
- Ntziachristos V., Schellenberger E.A., Ripoll J., Yessayan D., Graves E., Bogdanov A. Jr., et al. Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate. Proc Natl Acad Sci USA 2004; 101(33): 12294–12299, http://dx.doi.org/10.1073/pnas.0401137101.
- Hiller K.H., Waller C., Nahrendorf M., Bauer W.R., Jakob P.M. Assessment of cardiovascular apoptosis in the isolated rat heart by magnetic resonance molecular imaging. Mol Imaging 2006; 5(2): 115–121.
- van Tilborg G.A., Mulder W.J., Deckers N., Storm G., Reutelingsperger C.P., Strijkers G.J., Nicolay K. Annexin A5-functionalized bimodal lipid-based contrast agents for the detection of apoptosis. Bioconjug Chem 2006; 17(3): 741–749, http://dx.doi.org/10.1021/bc0600259.
- Zhao M., Beauregard D.A., Loizou L., Davletov B., Brindle K.M. Non-invasive detection of apoptosis using magnetic resonance imaging and a targeted contrast agent. Nat Med 2001; 7(11): 1241–1244, http://dx.doi.org/10.1038/nm1101-1241.
- Krishnan A.S., Neves A.A., de Backer M.M., Hu D.E., Davletov B., Kettunen M.I., Brindle K.M. Detection of cell death in tumors by using MR imaging and a gadolinium-based targeted contrast agent. Radiology 2008; 246(33): 854–862, http://dx.doi.org/10.1148/radiol.2463070471.
- Pop C., Salvesen G.S. Human caspases: activation, specificity, and regulation. J Biol Chem 2009; 284(33): 21777–21781, http://dx.doi.org/10.1074/jbc.R800084200.
- Nicholson D.W., Thornberry N.A. Caspases: killer proteases. Trends Biochem Sci 1997; 22(8): 299–306, http://dx.doi.org/10.1016/S0968-0004(97)01085-2.
- Delgado M.E., Olsson M., Lincoln F.A., Zhivotovsky B., Rehm M. Determining the contributions of caspase-2, caspase-8 and effector caspases to intracellular VDVADase activities during apoptosis initiation and execution. Biochim Biophys Acta 2013; 1833(10): 2279–2292, http://dx.doi.org/10.1016/j.bbamcr.2013.05.025.
- Laussmann M.A., Passante E., Hellwig C.T., Tomiczek B., Flanagan L., Prehn J.H., Huber H.J., Rehm M. Proteasome inhibition can impair caspase-8 activation upon submaximal stimulation of apoptotic tumor necrosis factor-related apoptosis inducing ligand (TRAIL) signaling. J Biol Chem 2012; 287(18): 14402–14411, http://dx.doi.org/10.1074/jbc.M111.304378.
- Yang F., Tu J., Pan J.Q., Luo H.L., Liu Y.H., Wan J., Zhang J., Wei P.F., Jiang T., Chen Y.H., Wang L.P. Light-controlled inhibition of malignant glioma by opsin gene transfer. Cell Death Dis 2013; 4: e893, http://dx.doi.org/10.1038/cddis.2013.425.
- Paulsson J.F., Schultz S.W., Köhler M., Leibiger I., Berggren P.O., Westermark G.T. Real-time monitoring of apoptosis by caspase-3-like protease induced FRET reduction triggered by amyloid aggregation. Exp Diabetes Res 2008; 2008: 865850, http://dx.doi.org/10.1155/2008/865850.
- Li I.T., Pham E., Truong K. Protein biosensors based on the principle of fluorescence resonance energy transfer for monitoring cellular dynamics. Biotechnol Lett 2006; 28(24): 1971–1982, http://dx.doi.org/10.1007/s10529-006-9193-5.
- Keese M., Offterdinger M., Tischer C., Girod A., Lommerse P.H., Yagublu V., Magdeburg R., Bastiaens P.I. Quantitative imaging of apoptosis commitment in colorectal tumor cells. Differentiation 2007; 75(9): 809–818, http://dx.doi.org/10.1111/j.1432-0436.2007.00186.x.
- Keese M., Yagublu V., Schwenke K., Post S., Bastiaens P. Fluorescence lifetime imaging microscopy of chemotherapy-induced apoptosis resistance in a syngenic mouse tumor model. Int J Cancer 2010; 126(1): 104–113, http://dx.doi.org/10.1002/ijc.24730.
- Kawai H., Suzuki T., Kobayashi T., Sakurai H., Ohata H., Honda K., Momose K., Namekata I., Tanaka H., Shigenobu K., Nakamura R., Hayakawa T., Kawanishi T. Simultaneous real-time detection of initiator- and effector-caspase activation by double fluorescence resonance energy transfer analysis. J Pharmacol Sci 2005; 93(7): 361–368, http://dx.doi.org/10.1254/jphs.fp0040592.
- Seervi M., Sobhan P.K., Mathew K.A., Joseph J., Pillai P.R., Santhoshkumar T.R. A high-throughput image-based screen for the identification of Bax/Bak-independent caspase activators against drug-resistant cancer cells. Apoptosis 2014; 19(1): 269–284, http://dx.doi.org/10.1007/s10495-013-0921-8.
- Rehm M., Dussmann H., Janicke R.U., Tavare J.M., Kogel D., Prehn J.H. Single-cell fluorescence resonance energy transfer analysis demonstrates that caspase activation during apoptosis is a rapid process. Role of caspase-3. J Biol Chem 2002; 277(27): 24506–24514, http://dx.doi.org/10.1074/jbc.m110789200.
- Wu Y., Xing D., Luo S., Tang Y., Chen Q. Detection of caspase-3 activation in single cells by fluorescence resonance energy transfer during photodynamic therapy induced apoptosis. Cancer Lett 2006; 235(2): 239–247, http://dx.doi.org/10.1016/j.canlet.2005.04.036.
- Janssen A., Beerling E., Medema R., van Rheenen J. Intravital FRET imaging of tumor cell viability and mitosis during chemotherapy. PLoS One 2013; 8(5): e64029, http://dx.doi.org/10.1371/journal.pone.0064029.
- Joseph J., Seervi M., Sobhan P.K., Retnabai S.T. High throughput ratio imaging to profile caspase activity: potential application in multiparameter high content apoptosis analysis and drug screening. PLoS One 2011; 6(5): e20114, http://dx.doi.org/10.1371/journal.pone.0020114.
- Pan W., Qu J., Chen T., Sun L., Qi J. FLIM and emission spectral analysis of caspase-3 activation inside single living cell during anticancer drug-induced cell death. Eur Biophys J 2009; 38(4): 447–456, http://dx.doi.org/10.1007/s00249-008-0390-0.
- Wang L., Chen T., Qu J., Wei X. Quantitative analysis of caspase-3 activation by fitting fluorescence emission spectra in living cells. Micron 2009; 40(8): 811–820, http://dx.doi.org/10.1016/j.micron.2009.07.001.
- Zhou F., Xing D., Wu S., Chen W.R. Intravital imaging of tumor apoptosis with FRET probes during tumor therapy. Mol Imaging Biol 2010; 12(1): 63–70, http://dx.doi.org/10.1007/s11307-009-0235-y.
- Wang F., Chen T.S., Xing D., Wang J.J., Wu Y.X. Measuring dynamics of caspase-3 activity in living cells using FRET technique during apoptosis induced by high fluence low-power laser irradiation. Lasers Surg Med 2005; 36(1): 2–7, http://dx.doi.org/10.1002/lsm.20130.
- Kominami K., Nagai T., Sawasaki T., Tsujimura Y., Yashima K., Sunaga Y., Tsuchimochi M., Nishimura J., Chiba K., Nakabayashi J., Koyamada K., Endo Y., Yokota H., Miyawaki A., Manabe N., Sakamaki K. In vivo imaging of hierarchical spatiotemporal activation of caspase-8 during apoptosis. PLoS One 2012; 7(11): e50218, http://dx.doi.org/10.1371/journal.pone.0050218.
- Pepperkok R., Squire A., Geley S., Bastiaens P.I. Simultaneous detection of multiple green fluorescent proteins in live cells by fluorescence lifetime imaging microscopy. Curr Biol 1999; 9(5): 269–272, http://dx.doi.org/10.1016/s0960-9822(99)80117-1.
- van Kuppeveld F.J., Melchers W.J., Willems P.H., Gadella T.W. Homomultimerization of the coxsackievirus 2B protein in living cells visualized by fluorescence resonance energy transfer microscopy. J Virol 2002; 76(18): 9446–9456, http://dx.doi.org/10.1128/jvi.76.18.9446-9456.2002.
- Chen N.T., Wu C.Y., Chung C.Y., Hwu Y., Cheng S.H., Mou C.Y., Lo L.W. Probing the dynamics of doxorubicin-DNA intercalation during the initial activation of apoptosis by fluorescence lifetime imaging microscopy (FLIM). PLoS One 2012; 7(9): e44947, http://dx.doi.org/10.1371/journal.pone.0044947.
- Verveer P.J., Squire A., Bastiaens P.I. Global analysis of fluorescence lifetime imaging microscopy data. Biophys J 2000; 78(4): 2127–2137, http://dx.doi.org/10.1016/s0006-3495(00)76759-2.
- Angres B., Steuer H., Weber P., Wagner M., Schneckenburger H. A membrane-bound FRET-based caspase sensor for detection of apoptosis using fluorescence lifetime and total internal reflection microscopy. Cytometry A 2009; 75(5): 420–427, http://dx.doi.org/10.1002/cyto.a.20698.
- Weber P., Schickinger S., Wagner M., Angres B., Bruns T., Schneckenburger H. Monitoring of apoptosis in 3D cell cultures by FRET and light sheet fluorescence microscopy. Int J Mol Sci 2015; 16(3): 5375–5385, http://dx.doi.org/10.3390/ijms16035375.
- Bozza W.P., Di X., Takeda K., Rivera Rosado L.A., Pariser S., Zhang B. The use of a stably expressed FRET biosensor for determining the potency of cancer drugs. PLoS One 2014; 9(9): e107010, http://dx.doi.org/10.1371/journal.pone.0107010.
- Savitsky A.P., Rusanov A.L., Zherdeva V.V., Gorodnicheva T.V., Khrenova M.G., Nemukhin A.V. FLIM-FRET imaging of caspase-3 activity in live cells using pair of red fluorescent proteins. Theranostics 2012; 2(2): 215–226, http://dx.doi.org/10.7150/thno.3885.
- Rusanov A.L., Ivashina T.V., Vinokurov L.M., Fiks I.I., Orlova A.G., Turchin I.V., Meerovich I.G., Zherdeva V.V., Savitsky A.P. Lifetime imaging of FRET between red fluorescent proteins. J Biophotonics 2010; 3(12): 774–783, http://dx.doi.org/10.1002/jbio.201000065.
- Shcherbo D., Souslova E.A., Goedhart J., Chepurnykh T.V., Gaintzeva A., Shemiakina I.I., Gadella T.W., Lukyanov S., Chudakov D.M. Practical and reliable FRET/FLIM pair of fluorescent proteins. BMC Biotechnol 2009; 9: 24, http://dx.doi.org/10.1186/1472-6750-9-24.
- Shcherbo D., Shemiakina I.I., Ryabova A.V., Luker K.E., Schmidt B.T., Souslova E.A., Gorodnicheva T.V., Strukova L., Shidlovskiy K.M., Britanova O.V., Zaraysky A.G., Lukyanov K.A., Loschenov V.B., Luker G.D., Chudakov D.M. Near-infrared fluorescent proteins. Nat Methods 2010; 7(10): 827–829, http://dx.doi.org/10.1038/nmeth.1501.
- Shu X., Royant A., Lin M.Z., Aguilera T.A., Lev-Ram V., Steinbach P.A., Tsien R.Y. Mammalian expression of infrared fluorescent proteins engineered from a bacterial phytochrome. Science 2009; 324(5928): 804–807, http://dx.doi.org/10.1126/science.1168683.
- Shcherbakova D.M., Verkhusha V.V. Near-infrared fluorescent proteins for multicolor in vivo imaging. Nat Methods 2013; 10(8): 751–754, http://dx.doi.org/10.1038/nmeth.2521.
- Subach O.M., Gundorov I.S., Yoshimura M., Subach F.V., Zhang J., Grüenwald D., Souslova E.A., Chudakov D.M., Verkhusha V.V. Conversion of red fluorescent protein into a bright blue probe. Chem Biol 2008; 15(10): 1116–1124, http://dx.doi.org/10.1016/j.chembiol.2008.08.006.
- Filonov G.S., Piatkevich K.D., Ting L.M., Zhang J., Kim K., Verkhusha V.V. Bright and stable near-infrared fluorescent protein for in vivo imaging. Nat Biotechnol 2011; 29(8): 757–761, http://dx.doi.org/10.1038/nbt.1918.
- Rajoria S., Zhao L., Intes X., Barroso M. FLIM-FRET for cancer applications. Curr Mol Imaging 2014; 3(2): 144–161, http://dx.doi.org/10.2174/2211555203666141117221111.
- Nguyen Q.D., Lavdas I., Gubbins J., Smith G., Fortt R., Carroll L.S., Graham M.A., Aboagye E.O. Temporal and spatial evolution of therapy-induced tumor apoptosis detected by caspase-3-selective molecular imaging. Clin Cancer Res 2013; 19: 3914–3924, http://dx.doi.org/10.1158/1078-0432.CCR-12-3814.
- Challapalli A., Kenny L.M., Hallett W.A., Kozlowski K., Tomasi G., Gudi M., Al-Nahhas A., Coombes R.C., Aboagye E.O. 18F-ICMT-11, a caspase-3-specific PET tracer for apoptosis: biodistribution and radiation dosimetry. J Nucl Med 2013; 54(9): 1551–1556, http://dx.doi.org/10.2967/jnumed.112.118760.
- Susin S.A., Lorenzo H.K., Zamzami N., Marzo I., Snow B.E., Brothers G.M., Mangion J., Jacotot E., Costantini P., Loeffler M., Larochette N., Goodlett D.R., Aebersold R., Siderovski D.P., Penninger J.M., Kroemer G. Molecular characterization of mitochondrial apoptosis-inducing factor. Nature 1999; 397(6718): 441–446, http://dx.doi.org/10.1038/17135.
- Maltese W.A., Overmeyer J.H. Non-apoptotic cell death associated with perturbations of macropinocytosis. Front Physiol 2015; 6: 38, http://dx.doi.org/10.3389/fphys.2015.00038.
- Susin S.A., Zamzami N., Kroemer G. Mitochondria as regulators of apoptosis: doubt no more. Biochim Biophys Acta 1998; 1366(1–2): 151–165, http://dx.doi.org/10.1016/S0005-2728(98)00110-8.
- Green D.R., Kroemer G. The pathophysiology of mitochondrial cell death. Science 2004; 305(5684): 626–629, http://dx.doi.org/10.1126/science.1099320.
- Bouchier-Hayes L., Muсoz-Pinedo C., Connell S., Green D.R. Measuring apoptosis at the single cell level. Methods 2008; 44(3): 222–228, http://dx.doi.org/10.1016/j.ymeth.2007.11.007.
- Madar I., Ravert H., Nelkin B., Abro M., Pomper M., Dannals R., Frost J.J. Characterization of membrane potential-dependent uptake of the novel PET tracer 18F-fluorobenzyl triphenylphosphonium cation. Eur J Nucl Med Mol Imaging 2007; 34(12): 2057–2065, http://dx.doi.org/10.1007/s00259-007-0500-8.
- Madar I., Huang Y., Ravert H., Dalrymple S.L., Davidson N.E., Isaacs J.T., Dannals R.F., Frost J.J. Detection and quantification of the evolution dynamics of apoptosis using the PET voltage sensor F-18-fluorobenzyl triphenyl phosphonium. J Nucl Med 2009; 50: 774–780, http://dx.doi.org/10.2967/jnumed.108.061283.
- Bortner C.D., Oldenburg N.B., Cidlowski J.A. The role of DNA fragmentation in apoptosis. Trends Cell Biol 1995; 5(1): 21–26, http://dx.doi.org/10.1016/S0962-8924(00)88932-1.
- Gorczyca W., Gong J., Darzynkiewicz Z. Detection of DNA strand breaks in individual apoptotic cells by the in situ terminal deoxynucleotidyl transferase and nick translation assays. Cancer Res 1993; 53: 1945–1951.
- Negoescu A., Guillermet C., Lorimier P., Brambilla E., Labat-Moleur F. Importance of DNA fragmentation in apoptosis with regard to TUNEL specificity. Biomed Pharmacother 1998; 52(6): 252–258, http://dx.doi.org/10.1016/S0753-3322(98)80010-3.
- Diaconu C.C., Szathmári M., Kéri G., Venetianer A. Apoptosis is induced in both drug-sensitive and multidrug-resistant hepatoma cells by somatostatin analogue TT-232. Br J Cancer 1999; 80(8): 1197–1203, http://dx.doi.org/10.1038/sj.bjc.6690486.
- Naruse I., Keino H., Kawarada Y. Antibody against single-stranded DNA detects both programmed cell death and drug-induced apoptosis. Histochemistry 1994; 101(1): 73–78, http://dx.doi.org/10.1007/bf00315834.
- Cornelissen B., Kersemans V., Darbar S., Thompson J., Shah K., Sleeth K., Hill M.A., Vallis K.A. Imaging DNA damage in vivo using gammaH2AX-targeted immunoconjugates. Cancer Res 2011; 71(13): 4539–4549, http://dx.doi.org/10.1158/0008-5472.CAN-10-4587.
- Porębska I., Kosacka M., Sobańska E., Wyrodek E., Jankowska R. Comparative expression of apoptotic markers in lung adenocarcinoma and squamous cell carcinoma. Adv Exp Med Biol 2015, http://dx.doi.org/10.1007/5584_2015_121. [Epub ahead of print].
- Wu Y., Kim S.G., Xing D., Liu L., Park J.C., Chen T., Chen W.R. Fluorescence resonance energy transfer analysis of bid activation in living cells during ultraviolet-induced apoptosis. Acta Biochim Biophys Sin (Shanghai) 2007; 39(1): 37–45, http://dx.doi.org/10.1111/j.1745-7270.2007.00246.x.
- Louie A. Multimodality imaging probes: design and challenges. Chem Rev 2010; 110(5): 3146–3195, http://dx.doi.org/10.1021/cr9003538.
- Sapsford K.E., Algar W.R., Berti L., Gemmill K.B., Casey B.J., Oh E., Stewart M.H., Medintz I.L. Functionalizing nanoparticles with biological molecules: developing chemistries that facilitate nanotechnology. Chem Rev 2013; 113(3): 1904–2074, http://dx.doi.org/10.1021/cr300143v.
- Xing Y., Zhao J., Conti P.S., Chen K. Radiolabeled nanoparticles for multimodality tumor imaging. Theranostics 2014; 4: 290–306, http://dx.doi.org/10.7150/thno.7341.